Pathogens are a broad group that include: (Infectious Disease is the specific branch of medicine that focuses on these infections and pathogens.)
- Parasites
- Bacteria
- Viruses
- Prions
- Viroids
- Fungi
All organisms with multiple cells(multicellular) are colonized to some extent by an extrinsic organisms. The large majority of these exist in either a relationship with the host like mentioned above. The difference between an infection and a colonization is due to the circumstance which exists as a result of the former. Basically if the colonization of the external body comprises the life of the host organisms it is an infection.
Several variables are involved which determine the intruders outcome on the host:
- The Route of entry
- The access to host regions that it gains
- The amount or load of the initial inoculant
- The intrinsic virulence of the particular organism
- The status of the immune system of the host that is being colonized
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